{"id":11872,"date":"2018-01-01T15:50:31","date_gmt":"2018-01-01T15:50:31","guid":{"rendered":"http:\/\/lequia-udg.com\/2018\/01\/01\/specific-detection-of-clostridium-autoethanogenum-clostridium-ljungdahlii-and-clostridium-carboxidivorans-in-complex-bioreactor-samples\/"},"modified":"2024-04-18T16:37:42","modified_gmt":"2024-04-18T16:37:42","slug":"specific-detection-of-clostridium-autoethanogenum-clostridium-ljungdahlii-and-clostridium-carboxidivorans-in-complex-bioreactor-samples","status":"publish","type":"post","link":"https:\/\/lequia-udg.com\/ca\/2018\/01\/01\/specific-detection-of-clostridium-autoethanogenum-clostridium-ljungdahlii-and-clostridium-carboxidivorans-in-complex-bioreactor-samples\/","title":{"rendered":"Specific detection of \u201cClostridium autoethanogenum\u201d, Clostridium ljungdahlii and Clostridium carboxidivorans in complex bioreactor samples"},"content":{"rendered":"\t\t
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\r\n\t\t\t\r\n\t\t\t\tAuthors: Cantos-Parra, E., Rami\u00f3-Pujol, S., Colprim, J., Puig, S., Ba\u00f1eras, L. \r\n\t\t\t\r\n\t\t\t<\/h4>\r\n\t\t

\r\n\t\t\t\r\n\t\t\t\tSpecific detection of \u201cClostridium autoethanogenum\u201d, Clostridium ljungdahlii and Clostridium carboxidivorans in complex bioreactor samples\r\n\t\t\t\r\n\t\t\t<\/h2>\r\n\t\t<\/div>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t
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The high genetic similarity between some carboxydotrophic bacteria does not allow for the use of common sequencing techniques targeting the 16S rRNA gene for species identification. 16S rRNA sequencing fails to discriminate among Clostridium ljungdahlii and \u2018Clostridium autoethanogenum\u2019, despite this two species exhibit significant differences in CO2<\/sub>\u00a0assimilation and alcohol production. In this work we designed PCR primers targeting for the DNA gyrase subunit A (gyrA) and a putative formate\/nitrite transporter (fnt) to specifically detect the presence of \u2018C. autoethanogenum\u2019, C. ljungdahlii or Clostridium carboxidivorans. We could confirm the simultaneous presence of C. ljungdahlii and \u2018C. autoethanogenum\u2019 in different bioreactors, and a preference of the latter for high CO2<\/sub>\u00a0content.\u00a0<\/p>\n\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t

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Year:<\/strong><\/td>\n2018<\/td>\n<\/tr>\n
Authors:<\/strong><\/td>\nCantos-Parra, E., Rami\u00f3-Pujol, S., Colprim, J., Puig, S., Ba\u00f1eras, L.<\/td>\n<\/tr>\n
Reference:<\/strong><\/td>\nFEMS Microbiology Letters Volume 365, Issue 18, 1 September 2018, Article number 191<\/td>\n<\/tr>\n
Link:<\/strong><\/td>\nhttp:\/\/dx.doi.org\/10.1093\/femsle\/fny191<\/a><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t
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Authors: Cantos-Parra, E., Rami\u00f3-Pujol, S., Colprim, J., Puig, S., Ba\u00f1eras, L. Specific detection of \u201cClostridium autoethanogenum\u201d, Clostridium ljungdahlii and Clostridium carboxidivorans in complex bioreactor samples The high genetic similarity between some carboxydotrophic bacteria does not allow for the use of common sequencing techniques targeting the 16S rRNA gene for species identification. 16S rRNA sequencing fails … Specific detection of \u201cClostridium autoethanogenum\u201d, Clostridium ljungdahlii and Clostridium carboxidivorans in complex bioreactor samples<\/span>“>Continue reading Specific detection of \u201cClostridium autoethanogenum\u201d, Clostridium ljungdahlii and Clostridium carboxidivorans in complex bioreactor samples<\/span><\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"closed","ping_status":"open","sticky":false,"template":"elementor_header_footer","format":"standard","meta":{"footnotes":""},"categories":[64],"tags":[],"class_list":["post-11872","post","type-post","status-publish","format-standard","hentry","category-articles-ca"],"_links":{"self":[{"href":"https:\/\/lequia-udg.com\/ca\/wp-json\/wp\/v2\/posts\/11872","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/lequia-udg.com\/ca\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/lequia-udg.com\/ca\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/lequia-udg.com\/ca\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/lequia-udg.com\/ca\/wp-json\/wp\/v2\/comments?post=11872"}],"version-history":[{"count":1,"href":"https:\/\/lequia-udg.com\/ca\/wp-json\/wp\/v2\/posts\/11872\/revisions"}],"predecessor-version":[{"id":11873,"href":"https:\/\/lequia-udg.com\/ca\/wp-json\/wp\/v2\/posts\/11872\/revisions\/11873"}],"wp:attachment":[{"href":"https:\/\/lequia-udg.com\/ca\/wp-json\/wp\/v2\/media?parent=11872"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/lequia-udg.com\/ca\/wp-json\/wp\/v2\/categories?post=11872"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/lequia-udg.com\/ca\/wp-json\/wp\/v2\/tags?post=11872"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}